WormBase Tree Display for Variation: WBVar00089920

WBVar00089920 Name: Public_name: n1047
    Other_name: CE31440:p.Tyr126Phe
      C37F5.1a.1:c.377A>T
      CE27833:p.Tyr86Phe
      C37F5.1b.1:c.257A>T
    HGVSg: CHROMOSOME_IV:g.2278917T>A
  Sequence_details: SMap: S_parent: Sequence: C37F5
    Flanking_sequences: ctcaccttcttaataatattcttctcataa aatatcgtaacgctctcgacagtttatcat
    Mapping_target: C37F5
    Type_of_mutation: Substitution: t a Curator_confirmed: WBPerson4055
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00026933
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00305307
      WBGene00002990
    Transcript: C37F5.1a.1 (12)
      C37F5.1b.1 (12)
      C37F5.2
    Interactor: WBInteraction000052422
      WBInteraction000500300
  Genetics: Interpolated_map_position: IV -8.47616
  Description: Phenotype: WBPhenotype:0000700 Paper_evidence: WBPaper00000762
          WBPaper00036232
        Curator_confirmed: WBPerson2021
          WBPerson712
        Penetrance: Complete: Paper_evidence: WBPaper00036232
              Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00000762
          Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000057 PATO:0000460 Paper_evidence: WBPaper00000762
                Curator_confirmed: WBPerson2021
  Reference: WBPaper00000762
    WBPaper00036232
  Remark: Variation flanks and nucleotide change automatically updated to be on the positive strand to fix mapping and gff dumping issues.
    [200224 mh6] reverse complemented/swapped the change and flanks to move the variation onto the plus strand Curator_confirmed: WBPerson4055
  Method: Substitution_allele