WormBase Tree Display for Variation: WBVar00090634

WBVar00090634 Evidence: Paper_evidence: WBPaper00004635
  Name: Public_name: n2994
    Other_name: T23G7.1.1:c.681-1G>A
      T23G7.2a.1:c.244-1430C>T
      T23G7.1.2:c.681-1G>A
    HGVSg: CHROMOSOME_II:g.9170822G>A
  Sequence_details: SMap: S_parent: Sequence: T23G7
    Flanking_sequences: aattataatagtctcaaatatctatttttaa agcaaatgtggaatgcagtgtatcatcaga
    Mapping_target: T23G7
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00004635
            Person_evidence: WBPerson37422
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00027348
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00011965
      WBGene00001061
    Transcript: T23G7.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T23G7.2a.1:c.244-1430C>T
        Intron_number: 3/9
      T23G7.1.1 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: T23G7.1.1:c.681-1G>A
        Intron_number: 5/12
      T23G7.1.2 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: T23G7.1.2:c.681-1G>A
        Intron_number: 5/12
    Interactor: WBInteraction000503607
      WBInteraction000503609
      WBInteraction000503614
      WBInteraction000503615
      WBInteraction000503616
      WBInteraction000503617
      WBInteraction000503618
      WBInteraction000503621
  Genetics: Interpolated_map_position: II 1.08085
  Reference: WBPaper00004635
  Remark: Originally curated incorrectly to this location tataatagtctcaaatatctatttttaagaGcaaatgtggaatgcagtgtatcatcagaca Corrected based on pers comm from Arturo Bujarrabal who prvided the resequencing data. Person_evidence: WBPerson37422
      Curator_confirmed: WBPerson1983
    Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00001061 Acceptor
  Method: Substitution_allele