WormBase Tree Display for Variation: WBVar00090785
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WBVar00090785 | Evidence | Paper_evidence | WBPaper00013412 | ||
---|---|---|---|---|---|
Name | Public_name | n4076 | |||
Other_name | Y111B2A.11.1:c.329-67_637-280del | ||||
Y111B2A.11.2:c.329-67_637-280del | |||||
HGVSg | CHROMOSOME_III:g.12605460_12606244del | ||||
Sequence_details | SMap | S_parent | Sequence | Y111B2A | |
Flanking_sequences | cgatatatttgtttagttacctcccttttt | ccggctttaaatgtaccttattaatcaaca | |||
Mapping_target | Y111B2A | ||||
Type_of_mutation | Deletion | ||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00027411 | ||||
Laboratory | MT | ||||
Status | Live | ||||
Affects | Gene | WBGene00007030 | |||
Transcript | Y111B2A.11.2 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | Y111B2A.11.2:c.329-67_637-280del | ||||
Intron_number | 3-5/10 | ||||
Exon_number | 4-5/11 | ||||
Y111B2A.11.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
HGVSc | Y111B2A.11.1:c.329-67_637-280del | ||||
Intron_number | 3-5/10 | ||||
Exon_number | 4-5/11 | ||||
Genetics | Interpolated_map_position | III | 18.0029 | ||
Mapping_data | In_multi_point | 4921 | |||
Reference | WBPaper00013412 | ||||
Method | Deletion_allele |