WormBase Tree Display for Variation: WBVar00091740

WBVar00091740 Name: Public_name: ok449
    Other_name: F57C7.3b.1:c.153+113_349del
      F57C7.3a.1:c.153+113_352del
    HGVSg: CHROMOSOME_X:g.10592531_10593013del
  Sequence_details: SMap: S_parent: Sequence: F57C7
    Flanking_sequences: aaaagaaaaagccgacacaaaccgctgtag CATTTGCCGCGCTTCAGATTCGAGCCTGCT
    Mapping_target: F57C7
    Type_of_mutation: Deletion
    PCR_product: OK449_external
      OK449_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031428
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00004749
    Transcript: F57C7.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F57C7.3a.1:c.153+113_352del
        cDNA_position: ?-408
        CDS_position: ?-352
        Protein_position: ?-118
        Intron_number: 2-3/7
        Exon_number: 3-4/8
      F57C7.3b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F57C7.3b.1:c.153+113_349del
        cDNA_position: ?-405
        CDS_position: ?-349
        Protein_position: ?-117
        Intron_number: 2-3/7
        Exon_number: 3-4/8
    Interactor: WBInteraction000524031
      WBInteraction000524032
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 4652
  Description (2)
  Reference: WBPaper00032446
    WBPaper00026825
    WBPaper00024413
    WBPaper00025474
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele