WormBase Tree Display for Variation: WBVar00102568
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| WBVar00102568 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00102568 | |||
| Other_name | pas7427 | ||||
| haw49659 | |||||
| cewivar00029762 | |||||
| ZK1010.2.1:c.905+79A>T | |||||
| HGVSg | CHROMOSOME_III:g.12976298T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_III | |
| Flanking_sequences | atatttaaaaaattcgatcatttttttttcgaaaaatgaagaaaatttaaaaatttaaagctaattttcagattaatcgatttttttctctaaatatcgcagtttttcgtaaaatcggattacaaaaatccgaaatttctgtgaatcatgttctggctctagatttttcgatttttacgtaaaaaaaaccaaaaaattctgatatgtatcgaaaaactcataaatttttcgattttttttcatgtttttagcaaaaaaacttctatcgaattcagtgtgcgccttttttggaatatattt | aaaaaaaaaacaaaattttttaaaggcgcacactctttttaatttgaatttttttcgcgattttttcagattcctaaccctatccgtctgtctagtgagaaatggcgtcccgtcatcgtataatatttctccaattcaggtcgttcccaatagaaatccttattcaacagggtacaatcaagattaatcgagtgtcgaagagctgcgaattctccggatctcatgagagcctgcttccggctccacggaatctttcccagagttagcgattttgtagtgttggagagtggctccgcaaga | |||
| Mapping_target | CHROMOSOME_III | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (21) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00182383 | |||
| WBVar01273942 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00014176 | |||
| Transcript | ZK1010.2.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK1010.2.1:c.905+79A>T | ||||
| Intron_number | 2/3 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
