WormBase Tree Display for Variation: WBVar00107868

WBVar00107868 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00107868
    Other_name: cbs43389
      cb43389 Paper_evidence: WBPaper00055507
    HGVSg: chrII:g.8305868A>G
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0058
    Flanking_sequences: atttcaaaactgtcaagacttactt agctcattttcatctctgactggct
    Mapping_target: cb25.fpc0058
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (22)
      Polymorphic_strain_digest (22)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00025861
    Transcript: CBG02894.1 VEP_consequence: splice_region_variant,synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG02894.1:c.540T>C
        HGVSp: CBP06375.1:p.Leu180%3D
        cDNA_position: 570
        CDS_position: 540
        Protein_position: 180
        Exon_number: 3/8
        Codon_change: ctT/ctC
        Amino_acid_change: L
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP