WormBase Tree Display for Variation: WBVar00116310
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WBVar00116310 | Evidence | Paper_evidence | WBPaper00030778 | ||
---|---|---|---|---|---|
WBPaper00055507 | |||||
Name | Public_name | WBVar00116310 | |||
Other_name | cbs51831 | ||||
cb51831 | Paper_evidence | WBPaper00055507 | |||
HGVSg | chrX:g.12358050C>T | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc2397 | |
Flanking_sequences | ctcttctatcccatccagcttctct | ctcaccgatttgaactcgattggga | |||
Mapping_target | cb25.fpc2397 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041077 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00032168 | |||
Transcript | CBG10925.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | CBG10925.1:c.303C>T | ||||
HGVSp | CBP02662.1:p.Leu101%3D | ||||
cDNA_position | 356 | ||||
CDS_position | 303 | ||||
Protein_position | 101 | ||||
Exon_number | 4/15 | ||||
Codon_change | ctC/ctT | ||||
Amino_acid_change | L | ||||
Reference | WBPaper00030778 | ||||
WBPaper00055507 | |||||
Remark | Predicted by: ssaha-SNP v2.0 | ||||
This SNP was observed in 1 sequencing read(s) | |||||
Method | SNP |