WormBase Tree Display for Variation: WBVar00116379

WBVar00116379 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00116379
    Other_name: cbs51900
      cb51900 Paper_evidence: WBPaper00055507
    HGVSg: chrX:g.12755625C>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2397
    Flanking_sequences: tccccagcactttccatcttctctc cccaattcgtaccttattcttgctc
    Mapping_target: cb25.fpc2397
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CAC HindI 146 119 117 111 101 90 46 41 31 27 26 23 22 20 19 17 14 13 7 6 2 2
      Polymorphic_strain_digest: CAC HindI 146 119 117 111 101 90 41 31 29 27 26 23 22 20 19 17 17 14 13 7 6 2 2
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00032220
    Transcript: CBG11009a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG11009a.1:c.324+13G>T
        Intron_number: 4/26
      CBG11009b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG11009b.1:c.324+13G>T
        Intron_number: 4/26
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP