WormBase Tree Display for Variation: WBVar00122333

WBVar00122333 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00122333
    Other_name: cbs57854
    HGVSg: chrI:g.13572310C>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4022
    Flanking_sequences: aaattatcaattttccagatgaaccgagcgatgcaagtgaaaccagccga acagacagccgtccggcaagtcccaaagataaaatggatgataagaagtt
    Mapping_target: cb25.fpc4022
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (15)
      Polymorphic_strain_digest (15)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00035657
    Transcript: CBG15358.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG15358.1:c.327C>A
        HGVSp: CBP33766.1:p.Asp109Glu
        cDNA_position: 388
        CDS_position: 327
        Protein_position: 109
        Exon_number: 5/11
        Codon_change: gaC/gaA
        Amino_acid_change: D/E
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP