WormBase Tree Display for Variation: WBVar00124215

WBVar00124215 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00124215
    Other_name: cbs59736
      cb59736 Paper_evidence: WBPaper00055507
    HGVSg: chrIII:g.8108071T>G
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4044a
    Flanking_sequences: tcatatttttgaggaatatctggta aaaaaaggataagtggaagagaaac
    Mapping_target: cb25.fpc4044a
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GTAC AfaI, Csp6I, RsaI 714 237 49
        GCNNGC BstC8I, Cac8I 891 109
        CAC HindI 85 77 70 62 60 59 59 55 55 51 46 45 41 34 25 25 24 24 21 19 16 13 13 12 5 2 2
      Polymorphic_strain_digest: GTAC AfaI, Csp6I, RsaI 498 237 216 49
        GCNNGC BstC8I, Cac8I 1000
        CAC HindI 85 77 70 62 60 59 59 55 55 51 46 45 41 34 25 25 24 24 21 19 16 13 13 10 5 2 2 2
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00036546
    Transcript: CBG16666a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG16666a.1:c.3663+47T>G
        Intron_number: 17/18
      CBG16666b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG16666b.1:c.3531+47T>G
        Intron_number: 17/17
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP