WormBase Tree Display for Variation: WBVar00127921

WBVar00127921 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00127921
    Other_name: cbs63442
    HGVSg: chrIV:g.5982899T>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4152
    Flanking_sequences: cgtatatttcaacgacgaaatcgaaacttttctctactagttcctgaacg caaaaaagaggtgacaacaacctcggagagagaaaaaattgaaaaattca
    Mapping_target: cb25.fpc4152
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (14)
      Polymorphic_strain_digest (14)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00039055
    Transcript: CBG19929a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG19929a.1:c.-2-4743A>T
        Intron_number: 1/10
      CBG19929b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG19929b.1:c.86-4743A>T
        Intron_number: 1/8
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP