WormBase Tree Display for Variation: WBVar00140315
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| WBVar00140315 | Name | Public_name | WBVar00140315 | ||
|---|---|---|---|---|---|
| Other_name | cbh44841 | ||||
| HGVSg | chrV:g.2273190C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | cb25.NA_193 | |
| Flanking_sequences | cacttttcgacgaagacaccgacgc | gcgtcttccattttaacgtcggatg | |||
| Mapping_target | cb25.NA_193 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis briggsae | |||
| Strain | WBStrain00041078 | ||||
| Laboratory | CP | ||||
| Person | WBPerson3706 | ||||
| WBPerson227 | |||||
| WBPerson225 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00042654 | |||
| Transcript | CBG24578a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | CBG24578a.1:c.1121-418G>A | ||||
| Intron_number | 7/11 | ||||
| CBG24578b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | CBG24578b.1:c.1209G>A | ||||
| HGVSp | CBP40114.1:p.Ala403%3D | ||||
| cDNA_position | 1218 | ||||
| CDS_position | 1209 | ||||
| Protein_position | 403 | ||||
| Exon_number | 8/11 | ||||
| Codon_change | gcG/gcA | ||||
| Amino_acid_change | A | ||||
| CBG24578c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | CBG24578c.1:c.1332G>A | ||||
| HGVSp | CBP43939.1:p.Ala444%3D | ||||
| cDNA_position | 1332 | ||||
| CDS_position | 1332 | ||||
| Protein_position | 444 | ||||
| Exon_number | 7/10 | ||||
| Codon_change | gcG/gcA | ||||
| Amino_acid_change | A | ||||
| CBG24578d.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | CBG24578d.1:c.1068G>A | ||||
| HGVSp | CBP41903.1:p.Ala356%3D | ||||
| cDNA_position | 1068 | ||||
| CDS_position | 1068 | ||||
| Protein_position | 356 | ||||
| Exon_number | 7/10 | ||||
| Codon_change | gcG/gcA | ||||
| Amino_acid_change | A | ||||
| CBG24578e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | CBG24578e.1:c.986-418G>A | ||||
| Intron_number | 7/11 | ||||
| CBG24578f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | CBG24578f.1:c.986-418G>A | ||||
| Intron_number | 7/10 | ||||
| CBG24578g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | CBG24578g.1:c.1121-418G>A | ||||
| Intron_number | 7/10 | ||||
| Method | SNP |
