WormBase Tree Display for Variation: WBVar00140316
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| WBVar00140316 | Name | Public_name | WBVar00140316 | ||
|---|---|---|---|---|---|
| Other_name | cbh44842 | ||||
| HGVSg | chrV:g.2273267T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | cb25.NA_193 | |
| Flanking_sequences | ccatagtcaccatagtcggtgtagg | catatcttgatgatgataaacgtca | |||
| Mapping_target | cb25.NA_193 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis briggsae | |||
| Strain | WBStrain00041078 | ||||
| Laboratory | CP | ||||
| Person | WBPerson3706 | ||||
| WBPerson227 | |||||
| WBPerson225 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00042654 | |||
| Transcript | CBG24578a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | CBG24578a.1:c.1121-495A>G | ||||
| Intron_number | 7/11 | ||||
| CBG24578b.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | CBG24578b.1:c.1132A>G | ||||
| HGVSp | CBP40114.1:p.Thr378Ala | ||||
| cDNA_position | 1141 | ||||
| CDS_position | 1132 | ||||
| Protein_position | 378 | ||||
| Exon_number | 8/11 | ||||
| Codon_change | Acc/Gcc | ||||
| Amino_acid_change | T/A | ||||
| CBG24578c.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | CBG24578c.1:c.1255A>G | ||||
| HGVSp | CBP43939.1:p.Thr419Ala | ||||
| cDNA_position | 1255 | ||||
| CDS_position | 1255 | ||||
| Protein_position | 419 | ||||
| Exon_number | 7/10 | ||||
| Codon_change | Acc/Gcc | ||||
| Amino_acid_change | T/A | ||||
| CBG24578d.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | CBG24578d.1:c.991A>G | ||||
| HGVSp | CBP41903.1:p.Thr331Ala | ||||
| cDNA_position | 991 | ||||
| CDS_position | 991 | ||||
| Protein_position | 331 | ||||
| Exon_number | 7/10 | ||||
| Codon_change | Acc/Gcc | ||||
| Amino_acid_change | T/A | ||||
| CBG24578e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | CBG24578e.1:c.986-495A>G | ||||
| Intron_number | 7/11 | ||||
| CBG24578f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | CBG24578f.1:c.986-495A>G | ||||
| Intron_number | 7/10 | ||||
| CBG24578g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | CBG24578g.1:c.1121-495A>G | ||||
| Intron_number | 7/10 | ||||
| Method | SNP |
