WormBase Tree Display for Variation: WBVar00140317
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WBVar00140317 | Name | Public_name | WBVar00140317 | ||
---|---|---|---|---|---|
Other_name | cbh44843 | ||||
HGVSg | chrV:g.2273440A>G | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.NA_193 | |
Flanking_sequences | gatgttttgcggcgggggtggcagt | ggaagtcttgatgatgggctggtgg | |||
Mapping_target | cb25.NA_193 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041078 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00042654 | |||
Transcript | CBG24578a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | CBG24578a.1:c.1120+488T>C | ||||
Intron_number | 7/11 | ||||
CBG24578b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG24578b.1:c.1127-168T>C | ||||
Intron_number | 7/10 | ||||
CBG24578c.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | CBG24578c.1:c.1082T>C | ||||
HGVSp | CBP43939.1:p.Leu361Pro | ||||
cDNA_position | 1082 | ||||
CDS_position | 1082 | ||||
Protein_position | 361 | ||||
Exon_number | 7/10 | ||||
Codon_change | cTa/cCa | ||||
Amino_acid_change | L/P | ||||
CBG24578d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG24578d.1:c.986-168T>C | ||||
Intron_number | 6/9 | ||||
CBG24578e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG24578e.1:c.985+488T>C | ||||
Intron_number | 7/11 | ||||
CBG24578f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG24578f.1:c.985+488T>C | ||||
Intron_number | 7/10 | ||||
CBG24578g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG24578g.1:c.1120+488T>C | ||||
Intron_number | 7/10 | ||||
Method | SNP |