WormBase Tree Display for Variation: WBVar00143034
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WBVar00143034 | Evidence | Paper_evidence | WBPaper00026866 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e204 | |||||
Other_name | Y37E11C.1b.1:c.640G>A | ||||||
Y37E11C.1c.1:c.172G>A | |||||||
CE31638:p.Asp214Asn | |||||||
CE31639:p.Asp58Asn | |||||||
CE21557:p.Asp389Asn | |||||||
Y37E11C.1a.1:c.1165G>A | |||||||
HGVSg | CHROMOSOME_IV:g.3523049G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | M57 | |||
Flanking_sequences | gcgggaaagctcgcccttcccgccggaatc | atgtctacactcaggtcaccgattcttccg | |||||
Mapping_target | M57 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00026866 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (13) | |||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006769 | |||||
Transcript | Y37E11C.1c.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
SIFT | 0 | deleterious | |||||
PolyPhen | 1 | probably_damaging | |||||
HGVSc | Y37E11C.1c.1:c.172G>A | ||||||
HGVSp | CE31639:p.Asp58Asn | ||||||
cDNA_position | 172 | ||||||
CDS_position | 172 | ||||||
Protein_position | 58 | ||||||
Exon_number | 2/4 | ||||||
Codon_change | Gat/Aat | ||||||
Amino_acid_change | D/N | ||||||
Y37E11C.1b.1 (12) | |||||||
Y37E11C.1a.1 (12) | |||||||
Interactor | WBInteraction000569521 | ||||||
Genetics | Interpolated_map_position | IV | -3.30051 | ||||
Mapping_data | In_2_point | 99 | |||||
448 | |||||||
484 | |||||||
1643 | |||||||
3276 | |||||||
In_multi_point (13) | |||||||
Description | Phenotype (13) | ||||||
Phenotype_not_observed (5) | |||||||
Reference (14) | |||||||
Method | Substitution_allele |