WormBase Tree Display for Variation: WBVar00143154

WBVar00143154 Evidence: Paper_evidence: WBPaper00002050
  Name: Public_name: e369
    Other_name: Y60A3A.1.1:c.-2G>A
    HGVSg: CHROMOSOME_V:g.20004422C>T
  Sequence_details: SMap: S_parent: Sequence: Y60A3A
    Flanking_sequences: atagtcacacaataatcacccaacccagct aatggagcagtttgacggcttcgagtacag
    Mapping_target: Y60A3A
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00002050
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (21)
    Laboratory: CB
      DCD
    Status: Live
  Affects: Gene: WBGene00006786
    Transcript: Y60A3A.1.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y60A3A.1.1:c.-2G>A
        cDNA_position: 64
        Exon_number: 1/11
    Interactor: WBInteraction000501069
      WBInteraction000501078
      WBInteraction000501089
      WBInteraction000504808
      WBInteraction000505156
      WBInteraction000519682
      WBInteraction000519683
      WBInteraction000519684
      WBInteraction000519685
      WBInteraction000519686
      WBInteraction000519687
      WBInteraction000519688
      WBInteraction000519689
      WBInteraction000519690
      WBInteraction000519691
      WBInteraction000519692
      WBInteraction000519693
      WBInteraction000519694
      WBInteraction000519695
      WBInteraction000519696
      WBInteraction000520369
  Genetics: Interpolated_map_position: V 24.4355
    Mapping_data: In_2_point: 137
        254
        849
        3379
        3380
        6116
        6128
        7012
        7165
      In_multi_point (22)
      In_pos_neg_data: 298
        2143
  Description: Phenotype (19)
    Phenotype_not_observed (8)
  Reference (25)
  Remark: e369 is a coupled mutation. In addition to the curated lesion there is a CAG to TAG substitution with flanking sequences agccgacgattcatgagaatgagccgttgg taatgcaaagtatcagcagacggatgttaa Paper_evidence: WBPaper00002050
  Method: Substitution_allele