WormBase Tree Display for Variation: WBVar00146105
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WBVar00146105 | Name | Public_name | gk798 | ||
---|---|---|---|---|---|
Other_name | F56A12.1.1:c.303+56_450del | ||||
HGVSg | CHROMOSOME_V:g.14373747_14374778del | ||||
Sequence_details | SMap | S_parent | Sequence | F56A12 | |
Flanking_sequences | cgagggaaatcaaatatcagaacttgaaaa | tatcattccaatgaattcgagacactcttc | |||
Mapping_target | F56A12 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | gk798_external | ||||
gk798_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036790 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00006775 | |||
Transcript | F56A12.1.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F56A12.1.1:c.303+56_450del | ||||
cDNA_position | ?-765 | ||||
CDS_position | ?-450 | ||||
Protein_position | ?-150 | ||||
Intron_number | 2-3/5 | ||||
Exon_number | 3-4/6 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |