WormBase Tree Display for Variation: WBVar00148943
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WBVar00148943 | Name | Public_name | WBVar00148943 | ||
---|---|---|---|---|---|
Other_name | haw2193 | ||||
haw113770 | |||||
cewivar00161803 | |||||
Y92H12A.4a.2:c.1976+185T>C | |||||
Y92H12A.4c.1:c.1484+185T>C | |||||
Y92H12A.4d.1:c.824+185T>C | |||||
Y92H12A.4a.1:c.1976+185T>C | |||||
HGVSg | CHROMOSOME_I:g.1526190T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y92H12A | |
Flanking_sequences | ctcaaatttctgaattatttttgaa | tccaaaagaaaaaaaaaaaaaaatt | |||
Mapping_target | Y92H12A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00533635 | |||
WBVar01309518 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022360 | |||
WBGene00305921 | |||||
Transcript | Y92H12A.4c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y92H12A.4c.1:c.1484+185T>C | ||||
Intron_number | 5/11 | ||||
Y92H12A.4a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y92H12A.4a.2:c.1976+185T>C | ||||
Intron_number | 10/17 | ||||
Y92H12A.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y92H12A.4a.1:c.1976+185T>C | ||||
Intron_number | 10/18 | ||||
Y92H12A.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y92H12A.4d.1:c.824+185T>C | ||||
Intron_number | 4/10 | ||||
Y92H12A.13 | |||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw2193 | ||||
Method | WGS_Hawaiian_Waterston |