WormBase Tree Display for Variation: WBVar00149776
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| WBVar00149776 | Name | Public_name | WBVar00149776 | ||
|---|---|---|---|---|---|
| Other_name | haw3026 | ||||
| haw114361 | |||||
| cewivar00162418 | |||||
| Y51F10.10a.1:c.321+390A>T | |||||
| Y51F10.10d.1:c.276+390A>T | |||||
| Y51F10.10c.1:c.276+390A>T | |||||
| Y51F10.10b.1:c.321+390A>T | |||||
| HGVSg | CHROMOSOME_I:g.1956475T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y51F10 | |
| Flanking_sequences | gctagaaaaaaaactttgaaaagtt | tttttatagattttcacaaaaaaat | |||
| Mapping_target | Y51F10 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01323051 | |||
| WBVar00534226 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021771 | |||
| Transcript | Y51F10.10a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51F10.10a.1:c.321+390A>T | ||||
| Intron_number | 4/8 | ||||
| Y51F10.10c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51F10.10c.1:c.276+390A>T | ||||
| Intron_number | 2/5 | ||||
| Y51F10.10b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51F10.10b.1:c.321+390A>T | ||||
| Intron_number | 4/8 | ||||
| Y51F10.10d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51F10.10d.1:c.276+390A>T | ||||
| Intron_number | 2/5 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw3026 | ||||
| Method | WGS_Hawaiian_Waterston |
