WormBase Tree Display for Variation: WBVar00155140
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| WBVar00155140 | Name | Public_name | WBVar00155140 | ||
|---|---|---|---|---|---|
| Other_name | haw8390 | ||||
| haw118147 | |||||
| cewivar00167833 | |||||
| T01H8.5a.1:c.*315C>T | |||||
| T01H8.5d.1:c.*315C>T | |||||
| T01H8.5d.2:c.*315C>T | |||||
| HGVSg | CHROMOSOME_I:g.8549634G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | M04C7 | |
| Flanking_sequences | acaagaaatgagtaactataaatag | gtattcataaaaagtattcaaactg | |||
| Mapping_target | M04C7 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01422154 | |||
| WBVar01346272 | |||||
| WBVar00538012 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001651 | |||
| Transcript | T01H8.5a.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T01H8.5a.1:c.*315C>T | ||||
| cDNA_position | 6455 | ||||
| Exon_number | 31/31 | ||||
| T01H8.5d.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T01H8.5d.1:c.*315C>T | ||||
| cDNA_position | 6382 | ||||
| Exon_number | 29/29 | ||||
| T01H8.5d.2 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T01H8.5d.2:c.*315C>T | ||||
| cDNA_position | 6244 | ||||
| Exon_number | 27/27 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw8390 | ||||
| Method | WGS_Hawaiian_Waterston |
