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WormBase Tree Display for Variation: WBVar00155141

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Name Class

WBVar00155141NamePublic_nameWBVar00155141
Other_namehaw8391
haw118148
cewivar00167834
T01H8.5d.1:c.5436+20G>A
T01H8.5a.1:c.5739+20G>A
T01H8.5d.2:c.5436+20G>A
T01H8.5e.1:c.4521+20G>A
T01H8.5c.1:c.5556+20G>A
HGVSgCHROMOSOME_I:g.8550390C>T
Sequence_detailsSMapS_parentSequenceT01H8
Flanking_sequencescaatattttttaaatcaactgaaataattttaaaaaaaacttacaatttc
Mapping_targetT01H8
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00538013
WBVar01422157
WBVar01346273
StatusLive
AffectsGeneWBGene00001651
TranscriptT01H8.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT01H8.5e.1:c.4521+20G>A
Intron_number18/19
T01H8.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT01H8.5a.1:c.5739+20G>A
Intron_number28/30
T01H8.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT01H8.5d.1:c.5436+20G>A
Intron_number26/28
T01H8.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT01H8.5c.1:c.5556+20G>A
Intron_number24/25
T01H8.5d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT01H8.5d.2:c.5436+20G>A
Intron_number24/26
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw8391
MethodWGS_Hawaiian_Waterston