WormBase Tree Display for Variation: WBVar00155141
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WBVar00155141 | Name | Public_name | WBVar00155141 | ||
---|---|---|---|---|---|
Other_name | haw8391 | ||||
haw118148 | |||||
cewivar00167834 | |||||
T01H8.5d.1:c.5436+20G>A | |||||
T01H8.5a.1:c.5739+20G>A | |||||
T01H8.5d.2:c.5436+20G>A | |||||
T01H8.5e.1:c.4521+20G>A | |||||
T01H8.5c.1:c.5556+20G>A | |||||
HGVSg | CHROMOSOME_I:g.8550390C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T01H8 | |
Flanking_sequences | caatattttttaaatcaactgaaat | aattttaaaaaaaacttacaatttc | |||
Mapping_target | T01H8 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00538013 | |||
WBVar01422157 | |||||
WBVar01346273 | |||||
Status | Live | ||||
Affects | Gene | WBGene00001651 | |||
Transcript | T01H8.5e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T01H8.5e.1:c.4521+20G>A | ||||
Intron_number | 18/19 | ||||
T01H8.5a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T01H8.5a.1:c.5739+20G>A | ||||
Intron_number | 28/30 | ||||
T01H8.5d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T01H8.5d.1:c.5436+20G>A | ||||
Intron_number | 26/28 | ||||
T01H8.5c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T01H8.5c.1:c.5556+20G>A | ||||
Intron_number | 24/25 | ||||
T01H8.5d.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T01H8.5d.2:c.5436+20G>A | ||||
Intron_number | 24/26 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw8391 | ||||
Method | WGS_Hawaiian_Waterston |