WormBase Tree Display for Variation: WBVar00165097
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| WBVar00165097 | Name | Public_name | WBVar00165097 | ||
|---|---|---|---|---|---|
| Other_name | haw18347 | ||||
| haw125312 | |||||
| cewivar00177527 | |||||
| C08E3.10b.1:c.425T>C | |||||
| CE39672:p.Leu142Ser | |||||
| C08E3.10a.1:c.548T>C | |||||
| CE34666:p.Leu183Ser | |||||
| HGVSg | CHROMOSOME_II:g.1620589A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C08E3 | |
| Flanking_sequences | cttgagatccttgttaaatagctct | aatagtctttgccaggcacaaatat | |||
| Mapping_target | C08E3 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01295671 | |||
| WBVar00545177 | |||||
| WBVar01360862 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00015602 | |||
| Transcript | C08E3.10a.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | C08E3.10a.1:c.548T>C | ||||
| HGVSp | CE34666:p.Leu183Ser | ||||
| cDNA_position | 567 | ||||
| CDS_position | 548 | ||||
| Protein_position | 183 | ||||
| Exon_number | 4/6 | ||||
| Codon_change | tTa/tCa | ||||
| Amino_acid_change | L/S | ||||
| C08E3.10b.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | C08E3.10b.1:c.425T>C | ||||
| HGVSp | CE39672:p.Leu142Ser | ||||
| cDNA_position | 425 | ||||
| CDS_position | 425 | ||||
| Protein_position | 142 | ||||
| Exon_number | 3/4 | ||||
| Codon_change | tTa/tCa | ||||
| Amino_acid_change | L/S | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw18347 | ||||
| Method | WGS_Hawaiian_Waterston |
