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WormBase Tree Display for Variation: WBVar00168192

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Name Class

WBVar00168192NamePublic_nameWBVar00168192
Other_namepas27010
haw21442
haw127592
Y110A2AR.3b.1:c.*561+126T>C
Y110A2AR.3b.2:c.*687T>C
Y110A2AR.3a.1:c.701+126T>C
HGVSgCHROMOSOME_II:g.2914741A>G
Sequence_detailsSMapS_parentSequenceY110A2AR
Flanking_sequencesttgagattttcggcgattttcagatatttttggccgtttttcggtgattt
Mapping_targetY110A2AR
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00022850From_analysisWGS_De_Bono
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00215234
WBVar01300405
WBVar01365652
WBVar01234487
WBVar00547457
StatusLive
AffectsGeneWBGene00022453
TranscriptY110A2AR.3b.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY110A2AR.3b.2:c.*687T>C
cDNA_position1060
Exon_number8/8
Y110A2AR.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY110A2AR.3a.1:c.701+126T>C
Intron_number8/9
Y110A2AR.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY110A2AR.3b.1:c.*561+126T>C
Intron_number8/8
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw21442
MethodWGS_Hawaiian_Waterston