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WormBase Tree Display for Variation: WBVar00172502

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Name Class

WBVar00172502NamePublic_nameWBVar00172502
Other_namehaw25752
haw130961
cewivar00184914
F57F10.1d.1:c.154+1643T>C
HGVSgCHROMOSOME_II:g.6135280T>C
Sequence_detailsSMapS_parentSequenceC29H12
Flanking_sequencescacgttcttctggccacatagtggtcataaaattcaagttttctaatttt
Mapping_targetC29H12
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00550826
WBVar01372365
StatusLive
AffectsGeneWBGene00019018
TranscriptF57F10.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF57F10.1d.1:c.154+1643T>C
Intron_number2/17
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw25752
MethodWGS_Hawaiian_Waterston