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WormBase Tree Display for Variation: WBVar00180273

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Name Class

WBVar00180273EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00180273
Other_namehaw47549
haw146320
cewivar00025924
Y41C4A.4c.1:c.117-3747T>C
Y41C4A.4b.1:c.150-3747T>C
Y41C4A.4e.1:c.93-3747T>C
Y41C4A.4d.1:c.168-3747T>C
Y41C4A.4a.1:c.150-3747T>C
HGVSgCHROMOSOME_III:g.11681463T>C
Sequence_detailsSMapS_parentSequenceY41C4A
Flanking_sequencesggtcaactctatccaaagagcaacaactctttttttttctctctgaaaag
Mapping_targetY41C4A
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (31)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00566185
StatusLive
AffectsGeneWBGene00000793
TranscriptY41C4A.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4e.1:c.93-3747T>C
Intron_number3/8
Y41C4A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4b.1:c.150-3747T>C
Intron_number2/6
Y41C4A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4a.1:c.150-3747T>C
Intron_number3/8
Y41C4A.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4d.1:c.168-3747T>C
Intron_number3/8
Y41C4A.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4c.1:c.117-3747T>C
Intron_number2/6
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw47549
MethodWGS_Hawaiian_Waterston