WormBase Tree Display for Variation: WBVar00180274
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WBVar00180274 | Name | Public_name | WBVar00180274 | ||
---|---|---|---|---|---|
Other_name | haw47550 | ||||
cewivar00198504 | |||||
Y41C4A.4c.1:c.117-2950T>C | |||||
Y41C4A.4b.1:c.150-2950T>C | |||||
Y41C4A.4a.1:c.150-2950T>C | |||||
Y41C4A.4d.1:c.168-2950T>C | |||||
Y41C4A.4e.1:c.93-2950T>C | |||||
HGVSg | CHROMOSOME_III:g.11682260T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y41C4A | |
Flanking_sequences | gcgttttaaacttgattaaggtttt | aaaaatcgatggacggcgaaacttt | |||
Mapping_target | Y41C4A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00000793 | |||
Transcript | Y41C4A.4e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y41C4A.4e.1:c.93-2950T>C | ||||
Intron_number | 3/8 | ||||
Y41C4A.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41C4A.4b.1:c.150-2950T>C | ||||
Intron_number | 2/6 | ||||
Y41C4A.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41C4A.4a.1:c.150-2950T>C | ||||
Intron_number | 3/8 | ||||
Y41C4A.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41C4A.4d.1:c.168-2950T>C | ||||
Intron_number | 3/8 | ||||
Y41C4A.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41C4A.4c.1:c.117-2950T>C | ||||
Intron_number | 2/6 | ||||
Remark | [20081124 db] this Variation was previously named hw47550 | ||||
Method | WGS_Hawaiian_Waterston |