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WormBase Tree Display for Variation: WBVar00180274

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Name Class

WBVar00180274NamePublic_nameWBVar00180274
Other_namehaw47550
cewivar00198504
Y41C4A.4c.1:c.117-2950T>C
Y41C4A.4b.1:c.150-2950T>C
Y41C4A.4a.1:c.150-2950T>C
Y41C4A.4d.1:c.168-2950T>C
Y41C4A.4e.1:c.93-2950T>C
HGVSgCHROMOSOME_III:g.11682260T>C
Sequence_detailsSMapS_parentSequenceY41C4A
Flanking_sequencesgcgttttaaacttgattaaggttttaaaaatcgatggacggcgaaacttt
Mapping_targetY41C4A
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000793
TranscriptY41C4A.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4e.1:c.93-2950T>C
Intron_number3/8
Y41C4A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4b.1:c.150-2950T>C
Intron_number2/6
Y41C4A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4a.1:c.150-2950T>C
Intron_number3/8
Y41C4A.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4d.1:c.168-2950T>C
Intron_number3/8
Y41C4A.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4c.1:c.117-2950T>C
Intron_number2/6
Remark[20081124 db] this Variation was previously named hw47550
MethodWGS_Hawaiian_Waterston