WormBase Tree Display for Variation: WBVar00181871
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WBVar00181871 | Name | Public_name | WBVar00181871 | ||
---|---|---|---|---|---|
Other_name | haw49147 | ||||
cewivar00124923 | |||||
Y111B2A.14b.1:c.*310T>A | |||||
Y111B2A.14a.2:c.*98-56T>A | |||||
Y111B2A.14a.3:c.*68-70T>A | |||||
Y111B2A.14a.1:c.*310T>A | |||||
HGVSg | CHROMOSOME_III:g.12651541T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y111B2A | |
Flanking_sequences | caatttttaatattctatcgataaa | aaattattttattctattcgagccc | |||
Mapping_target | Y111B2A | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004161 | |||
Transcript | Y111B2A.14b.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y111B2A.14b.1:c.*310T>A | ||||
cDNA_position | 4651 | ||||
Exon_number | 23/23 | ||||
Y111B2A.14a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y111B2A.14a.1:c.*310T>A | ||||
cDNA_position | 4568 | ||||
Exon_number | 23/23 | ||||
Y111B2A.14a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y111B2A.14a.3:c.*68-70T>A | ||||
Intron_number | 23/23 | ||||
Y111B2A.14a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y111B2A.14a.2:c.*98-56T>A | ||||
Intron_number | 23/23 | ||||
Remark | [20081124 db] this Variation was previously named hw49147 | ||||
Method | WGS_Hawaiian_Waterston |