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WormBase Tree Display for Variation: WBVar00186443

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Name Class

WBVar00186443NamePublic_nameWBVar00186443
Other_namesnp_Y54G2A[12]
haw53719
haw150682
cewivar00203411
Y54G2A.33.2:c.214+379A>C
Y54G2A.33.1:c.214+379A>C
HGVSgCHROMOSOME_IV:g.2843067A>C
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesgttttccgcaaaaaaaaattctaaaatgtcggaattttcaaaaattcaaa
Mapping_targetY54G2A
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00247624
WBVar00570547
StatusLive
AffectsGeneWBGene00021895
TranscriptY54G2A.33.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.33.1:c.214+379A>C
Intron_number2/4
Y54G2A.33.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.33.2:c.214+379A>C
Intron_number2/3
ReferenceWBPaper00038208
WBPaper00004703
Remark[20081124 db] this Variation was previously named hw53719
MethodWGS_Hawaiian_Waterston