WormBase Tree Display for Variation: WBVar00200634
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WBVar00200634 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00200634 | |||
Other_name | haw67910 | ||||
haw159554 | |||||
cewivar00040854 | |||||
Y108G3AL.7f.1:c.1690+676A>T | |||||
Y108G3AL.7e.1:c.1690+676A>T | |||||
Y108G3AL.7b.1:c.3679+676A>T | |||||
Y108G3AL.7a.1:c.3679+676A>T | |||||
Y108G3AL.7c.1:c.3538+676A>T | |||||
Y108G3AL.7d.1:c.3538+676A>T | |||||
HGVSg | CHROMOSOME_V:g.196068A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y108G3AR | |
Flanking_sequences | attatctctgaaaaaaaaagaaatt | aaaaaaaagtttttccgccgaaaac | |||
Mapping_target | Y108G3AR | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00579419 | |||
Status | Live | ||||
Affects | Gene | WBGene00044689 | |||
Transcript | Y108G3AL.7a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y108G3AL.7a.1:c.3679+676A>T | ||||
Intron_number | 9/12 | ||||
Y108G3AL.7c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y108G3AL.7c.1:c.3538+676A>T | ||||
Intron_number | 6/8 | ||||
Y108G3AL.7d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y108G3AL.7d.1:c.3538+676A>T | ||||
Intron_number | 6/8 | ||||
Y108G3AL.7b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y108G3AL.7b.1:c.3679+676A>T | ||||
Intron_number | 9/12 | ||||
Y108G3AL.7e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y108G3AL.7e.1:c.1690+676A>T | ||||
Intron_number | 2/4 | ||||
Y108G3AL.7f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y108G3AL.7f.1:c.1690+676A>T | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw67910 | ||||
Method | WGS_Hawaiian_Waterston |