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WormBase Tree Display for Variation: WBVar00200634

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Name Class

WBVar00200634EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00200634
Other_namehaw67910
haw159554
cewivar00040854
Y108G3AL.7f.1:c.1690+676A>T
Y108G3AL.7e.1:c.1690+676A>T
Y108G3AL.7b.1:c.3679+676A>T
Y108G3AL.7a.1:c.3679+676A>T
Y108G3AL.7c.1:c.3538+676A>T
Y108G3AL.7d.1:c.3538+676A>T
HGVSgCHROMOSOME_V:g.196068A>T
Sequence_detailsSMapS_parentSequenceY108G3AR
Flanking_sequencesattatctctgaaaaaaaaagaaattaaaaaaaagtttttccgccgaaaac
Mapping_targetY108G3AR
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00579419
StatusLive
AffectsGeneWBGene00044689
TranscriptY108G3AL.7a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY108G3AL.7a.1:c.3679+676A>T
Intron_number9/12
Y108G3AL.7c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY108G3AL.7c.1:c.3538+676A>T
Intron_number6/8
Y108G3AL.7d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY108G3AL.7d.1:c.3538+676A>T
Intron_number6/8
Y108G3AL.7b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY108G3AL.7b.1:c.3679+676A>T
Intron_number9/12
Y108G3AL.7e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY108G3AL.7e.1:c.1690+676A>T
Intron_number2/4
Y108G3AL.7f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY108G3AL.7f.1:c.1690+676A>T
Intron_number2/4
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw67910
MethodWGS_Hawaiian_Waterston