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WormBase Tree Display for Variation: WBVar00203595

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Name Class

WBVar00203595NamePublic_nameWBVar00203595
Other_namehaw70871
cewivar00223227
T06A1.4a.2:c.186-464A>T
T06A1.4b.1:c.12-464A>T
T06A1.4a.1:c.186-464A>T
T06A1.4c.1:c.192-464A>T
HGVSgCHROMOSOME_V:g.1949850A>T
Sequence_detailsSMapS_parentSequenceT06A1
Flanking_sequencestttttcaaaagacttccaaaataaatttcaaaaactctcaacaccgagtt
Mapping_targetT06A1
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00020279
TranscriptT06A1.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06A1.4a.1:c.186-464A>T
Intron_number3/6
T06A1.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06A1.4c.1:c.192-464A>T
Intron_number1/3
T06A1.4a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06A1.4a.2:c.186-464A>T
Intron_number4/7
T06A1.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06A1.4b.1:c.12-464A>T
Intron_number1/3
Remark[20081124 db] this Variation was previously named hw70871
MethodWGS_Hawaiian_Waterston