WormBase Tree Display for Variation: WBVar00226124
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WBVar00226124 | Name | Public_name | WBVar00226124 | ||
---|---|---|---|---|---|
Other_name | pas37900 | ||||
cewivar00092370 | |||||
CE25099:p.Val118= | |||||
T05C12.2.1:c.354A>T | |||||
HGVSg | CHROMOSOME_II:g.8176460T>A | ||||
Sequence_details | SMap | S_parent | Sequence | T05C12 | |
Flanking_sequences | gacctataacactagtatgtttctataaactgaatgttctcttaccaataatttgagttaaaaggaaatccaaattaatatattgtccattatatgtccatgatcccaatttcagaaaacaagtttgtttatcaaatggataataagtgacatcaatctaaaataatgtggttttgaaatcattaagtatcgttttctcacttgacaaacgaatctaaaaattccaggtgggttttgttgaacatctccatttgatgatactatgaatcttgaagaatatgttgaatcaaatgattccga | acactgcaaagtggtttagatttaaatatttctaagaacaagagttacctattgaataaaagcacgtctggtctccaaagtttgaaacttgcatcatcatctcctgaaatttaagatagtatctagaataattttagaaaatgcaatttaaatcagctgagccgcaatggagacgcaacctaatgtaagtttgagacgcgtaattacctgaaaatcgtacatctcgaattccgccaaataatttaggatcccaagtcaatttataatcattccagtgctgtaaattagttgttttcattt | |||
Mapping_target | T05C12 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00000053 | |||
Transcript | T05C12.2.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T05C12.2.1:c.354A>T | ||||
HGVSp | CE25099:p.Val118= | ||||
cDNA_position | 354 | ||||
CDS_position | 354 | ||||
Protein_position | 118 | ||||
Exon_number | 5/12 | ||||
Codon_change | gtA/gtT | ||||
Amino_acid_change | V | ||||
Method | WGS_Pasadena_Quinlan |