WormBase Tree Display for Variation: WBVar00229356
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WBVar00229356 | Name | Public_name | WBVar00229356 | ||
---|---|---|---|---|---|
Other_name | pas41132 | ||||
cewivar00115229 | |||||
F25C8.3a.1:c.95+20C>A | |||||
F25C8.3c.1:c.41+20C>A | |||||
F25C8.3d.1:c.95+20C>A | |||||
F25C8.3b.1:c.95+20C>A | |||||
F25C8.3e.1:c.95+20C>A | |||||
HGVSg | CHROMOSOME_V:g.20879968C>A | ||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | |
Flanking_sequences | accgcctcttttattcgtattcttattcgtttgttttttcttcattctttcttcattgactagaagaatcttcatcgtgaaacttttccaaaatccgcatagtcgcttttctaatattcaattcaaatcagcaatgtgatggttatattttttgaaaacagtggatctgtccgaaaattataaagaatgcatgttcgatacttacagcacgaacacacaggcactgtccaacttcttcttatgcctctttctacggcggcttcatttaagagtgctaaatggtatgtttaagtagcaata | aaacaaaaaaaaacaggcaccggatcgcccaaaatccagaaaaacaggcgctgaacatgtagcttaatcctgttcgccacgtggtgccaaagtgccccattttggtttgatcttcgaaaaattcgggagaagagacgcagacttctcaactgattttgcatggttaagagtgtgctgacgtcatattttccggggaaaaaattccctcattttttgtagatcaaaccgcaaagagacagcctgacaccacgtagttcgccaggactactaacacaaaattttcaaaaaatgccaaacttt | |||
Mapping_target | F25C8 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (22) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006812 | |||
Transcript | F25C8.3d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3d.1:c.95+20C>A | ||||
Intron_number | 1/36 | ||||
F25C8.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3b.1:c.95+20C>A | ||||
Intron_number | 2/35 | ||||
F25C8.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3e.1:c.95+20C>A | ||||
Intron_number | 1/33 | ||||
F25C8.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3c.1:c.41+20C>A | ||||
Intron_number | 1/34 | ||||
F25C8.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3a.1:c.95+20C>A | ||||
Intron_number | 1/36 | ||||
Method | WGS_Pasadena_Quinlan |