WormBase Tree Display for Variation: WBVar00249816

WBVar00249816 Name: Public_name: tm788
    HGVSg: CHROMOSOME_X:g.12466567_12467370delinsAAAGCAATATAAATTTTAAAAGCAATACCTCTCCGATTGCTATCATGTGAATCTGTTGAGTCAGCTTC
  Sequence_details: SMap: S_parent: Sequence: T18D3
    Flanking_sequences: atcatgtgaatctgttgagtcagcttcatc taaattcatatgcatatggctcactctgac
    Mapping_target: T18D3
    Source_location: 7 CHROMOSOME_X 12466566 12467371 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: AAAGCAATATAAATTTTAAAAGCAATACCTCTCCGATTGCTATCATGTGAATCTGTTGAGTCAGCTTC
      Deletion
    PCR_product: tm788_external
      tm788_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 788
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00011821
    Transcript: T18D3.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-245
        CDS_position: ?-105
        Protein_position: ?-35
        Intron_number: 2/9
        Exon_number: 1-3/10
    Interactor: WBInteraction000524618
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description (2)
  Reference: WBPaper00040622
    WBPaper00033166
  Remark: 28668/28669-AAAGCAATATAAATTTTAAAAGCAATACCTCTCCGATTGCTATCATGTGAATCTGTTGAGTCAGCTTC-29472/29473 (804 bp deletion +69 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele