WormBase Tree Display for Variation: WBVar00251143

WBVar00251143 Name: Public_name: tm2217
    Other_name: C08F8.8.1:c.367-230_807-48del
    HGVSg: CHROMOSOME_IV:g.11172919_11174002del
  Sequence_details: SMap: S_parent: Sequence: C08F8
    Flanking_sequences: tattctggggcagatgttttaatgtttcta gtaccatctttccttctgaaaacttcacag
    Mapping_target: C08F8
    Source_location: 7 CHROMOSOME_IV 11172918 11174003 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm2217_external
      tm2217_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00027634
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 2217
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003657
    Transcript: C08F8.8.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C08F8.8.1:c.367-230_807-48del
        Intron_number: 5-7/9
        Exon_number: 6-7/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype (13)
  Reference: WBPaper00039839
  Remark: 24339/24340-25423/25424 (1081 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele