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WormBase Tree Display for Variation: WBVar00323186

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Name Class

WBVar00323186EvidencePaper_evidenceWBPaper00038249
NamePublic_namevs145
Other_nameCE42722:p.Gly831Arg
CE47042:p.Gly885Arg
F52B5.1b.1:c.2491G>C
F52B5.1a.1:c.2365G>C
F52B5.1c.1:c.2653G>C
CE27167:p.Gly789Arg
HGVSgCHROMOSOME_I:g.8298976C>G
Sequence_detailsSMapS_parentSequenceF52B5
Flanking_sequencescagcgacatagatgggaagtccaaggaatcaaccattagaattgaaacagaaagaacgag
Mapping_targetF52B5
Type_of_mutationSubstitutioncgCurator_confirmedWBPerson4055
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryLX
StatusLive
AffectsGeneWBGene00009920
TranscriptF52B5.1c.1 (12)
F52B5.1b.1 (12)
F52B5.1a.1 (12)
InteractorWBInteraction000501227
WBInteraction000501230
GeneticsInterpolated_map_positionI2.70896
DescriptionPhenotypeWBPhenotype:0000006Paper_evidenceWBPaper00038249
Curator_confirmedWBPerson712
RemarkAnimals exhibit decreased egg production.Paper_evidenceWBPaper00038249
Curator_confirmedWBPerson712
PenetranceIncompletePaper_evidenceWBPaper00038249
Curator_confirmedWBPerson712
WBPhenotype:0001905Paper_evidenceWBPaper00038249
Curator_confirmedWBPerson712
Remarkabts-1 mutants lay fewer cumulative eggs than do wild-type animals.Paper_evidenceWBPaper00038249
Curator_confirmedWBPerson712
Phenotype_not_observedWBPhenotype:0000546Paper_evidenceWBPaper00038249
Curator_confirmedWBPerson712
ReferenceWBPaper00038249
RemarkVariation flanks and nucleotide change automatically updated to be on the positive strand to fix mapping and gff dumping issues.
[200224 mh6] reverse complemented/swapped the change and flanks to move the variation onto the plus strandCurator_confirmedWBPerson4055
MethodSubstitution_allele