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WormBase Tree Display for Variation: WBVar00539711

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Name Class

WBVar00539711NamePublic_nameWBVar00539711
Other_namehaw119846
cewivar00170457
F11A6.1a.1:c.1888+4A>G
F11A6.1a.2:c.1888+4A>G
HGVSgCHROMOSOME_I:g.11680387A>G
Sequence_detailsSMapS_parentSequenceF11A6
Flanking_sequencesGGCCGCCGGGCTGTGGATTCTGGAAATCGATAATGATGGATGGGATGGTGGTATTGATTTCTGAAAATTCATTGATTTTTAGGAGTGATTATCGATTTTT
Mapping_targetF11A6
Type_of_mutationSubstitutionag
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryAX
PersonWBPerson4037
AnalysisWGS_Yanai
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01349692
StatusLive
AffectsGeneWBGene00002232
TranscriptF11A6.1a.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScF11A6.1a.1:c.1888+4A>G
Intron_number7/8
F11A6.1a.2VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScF11A6.1a.2:c.1888+4A>G
Intron_number7/8
ReferenceWBPaper00038208
WBPaper00037807
MethodWGS_Yanai