WormBase Tree Display for Variation: WBVar00539711
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WBVar00539711 | Name | Public_name | WBVar00539711 | ||
---|---|---|---|---|---|
Other_name | haw119846 | ||||
cewivar00170457 | |||||
F11A6.1a.1:c.1888+4A>G | |||||
F11A6.1a.2:c.1888+4A>G | |||||
HGVSg | CHROMOSOME_I:g.11680387A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F11A6 | |
Flanking_sequences | GGCCGCCGGGCTGTGGATTCTGGAAATCGATAATGATGGATGGGATGGTG | GTATTGATTTCTGAAAATTCATTGATTTTTAGGAGTGATTATCGATTTTT | |||
Mapping_target | F11A6 | ||||
Type_of_mutation | Substitution | a | g | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01349692 | |||
Status | Live | ||||
Affects | Gene | WBGene00002232 | |||
Transcript | F11A6.1a.1 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | F11A6.1a.1:c.1888+4A>G | ||||
Intron_number | 7/8 | ||||
F11A6.1a.2 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | ||||
HGVSc | F11A6.1a.2:c.1888+4A>G | ||||
Intron_number | 7/8 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Method | WGS_Yanai |