WormBase Tree Display for Variation: WBVar00570723
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WBVar00570723 | Evidence | Paper_evidence | WBPaper00038208 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00570723 | ||||
Other_name | haw150858 | |||||
cewivar00203671 | ||||||
CE49025:p.Leu67Pro | ||||||
Y54G2A.73b.1:c.200T>C | ||||||
CE48590:p.Leu349Pro | ||||||
Y54G2A.73a.1:c.1046T>C | ||||||
HGVSg | CHROMOSOME_IV:g.3000638A>G | |||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||
Flanking_sequences | TGCAATTTTCGCGGCGGTGAAAAAATAAACCTTGATAGACAATTTTTTTG | GCGGTTGCTGAAGAAGCTCCTCTAATTGAGTCTTCGGACGTTTTGTACCA | ||||
Mapping_target | Y54G2A | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (11) | ||||||
Person | WBPerson4037 | |||||
Analysis | WGS_Yanai | |||||
Million_mutation_project_reanalysis | ||||||
Status | Live | |||||
Affects | Gene | WBGene00219425 | ||||
Transcript | Y54G2A.73b.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
PolyPhen | 0 | unknown | ||||
HGVSc | Y54G2A.73b.1:c.200T>C | |||||
HGVSp | CE49025:p.Leu67Pro | |||||
cDNA_position | 200 | |||||
CDS_position | 200 | |||||
Protein_position | 67 | |||||
Exon_number | 2/2 | |||||
Codon_change | cTc/cCc | |||||
Amino_acid_change | L/P | |||||
Y54G2A.73a.1 (12) | ||||||
Reference | WBPaper00038208 | |||||
Method | WGS_Yanai |