WormBase Tree Display for Variation: WBVar01264314
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| WBVar01264314 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01264314 | |||||
| Other_name | cewivar00150666 | ||||||
| F47D12.1c.1:c.157-845A>G | |||||||
| F47D12.1a.1:c.157-845A>G | |||||||
| F47D12.1b.1:c.157-845A>G | |||||||
| F47D12.1d.1:c.157-845A>G | |||||||
| HGVSg | CHROMOSOME_III:g.6313351A>G | ||||||
| Sequence_details | SMap | S_parent | Sequence | F47D12 | |||
| Flanking_sequences | AAGCAAAAGACGATTGCCCAAACGAAGCCTATTTTGGCAAAGGAAGGGGC | ACGACGCGGCTCTTTCTTTAACCCGAAGGAATCTGTGAAGGTTTTCCACT | |||||
| Mapping_target | F47D12 | ||||||
| Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain (17) | |||||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539099827 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00001518 | |||||
| Transcript | F47D12.1d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | F47D12.1d.1:c.157-845A>G | ||||||
| Intron_number | 1/4 | ||||||
| F47D12.1b.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | F47D12.1b.1:c.157-845A>G | ||||||
| Intron_number | 2/12 | ||||||
| F47D12.1a.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | F47D12.1a.1:c.157-845A>G | ||||||
| Intron_number | 2/13 | ||||||
| F47D12.1c.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | F47D12.1c.1:c.157-845A>G | ||||||
| Intron_number | 2/12 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
