WormBase Tree Display for Variation: WBVar01392182
expand all nodes | collapse all nodes | view schema
WBVar01392182 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01392182 | ||||
Other_name | cewivar00739688 | |||||
F11A6.1a.2:c.264+191del | ||||||
F11A6.1a.1:c.264+191del | ||||||
HGVSg | CHROMOSOME_I:g.11676499del | |||||
Sequence_details | SMap | S_parent | Sequence | F11A6 | ||
Flanking_sequences | TTATAAATTTTTAACAAATTAAAAGAAACATAAAAACATTTTAGATCGTC | AAAAATAATTATTTTAAGCAAAGTTAGAAAATTTTCAAAAAAAAATCAAG | ||||
Mapping_target | F11A6 | |||||
Type_of_mutation | Deletion | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539111759 | ||
Status | Live | |||||
Affects | Gene | WBGene00002232 | ||||
Transcript | F11A6.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F11A6.1a.1:c.264+191del | |||||
Intron_number | 2/8 | |||||
F11A6.1a.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F11A6.1a.2:c.264+191del | |||||
Intron_number | 2/8 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |