WormBase Tree Display for Variation: WBVar01468311
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WBVar01468311 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar01468311 | |||
Other_name | F56B6.2a.1:c.1206-12T>G | ||||
F56B6.2c.1:c.21-12T>G | |||||
F56B6.2i.1:c.1212-12T>G | |||||
F56B6.2h.1:c.1212-12T>G | |||||
F56B6.2b.1:c.1095-12T>G | |||||
F56B6.2j.1:c.1206-12T>G | |||||
HGVSg | CHROMOSOME_X:g.3547557T>G | ||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | |
Flanking_sequences | TTATTTTTCCATAAATCCATCTGTAAAACT | AATATTTTCAGAAAGAAACGAATCCTGGGA | |||
Mapping_target | F56B6 | ||||
Type_of_mutation | Substitution | t | g | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | ||
WBStrain00031284 | From_analysis | WGS_Andersen | |||
Laboratory | QX | ||||
Person | WBPerson1730 | ||||
Analysis | WGS_Andersen | ||||
DB_info | Database (2) | ||||
Status | Live | ||||
Affects | Gene | WBGene00004350 | |||
Transcript | F56B6.2j.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2j.1:c.1206-12T>G | ||||
Intron_number | 6/14 | ||||
F56B6.2i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2i.1:c.1212-12T>G | ||||
Intron_number | 7/16 | ||||
F56B6.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2b.1:c.1095-12T>G | ||||
Intron_number | 6/15 | ||||
F56B6.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2a.1:c.1206-12T>G | ||||
Intron_number | 7/16 | ||||
F56B6.2h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2h.1:c.1212-12T>G | ||||
Intron_number | 7/16 | ||||
F56B6.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2c.1:c.21-12T>G | ||||
Intron_number | 1/9 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Andersen |