WormBase Tree Display for Variation: WBVar01468312
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WBVar01468312 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar01468312 | |||
Other_name | cewivar00542199 | ||||
F56B6.2j.1:c.1706-466A>G | |||||
F56B6.2i.1:c.1703-466A>G | |||||
F56B6.2h.1:c.1712-466A>G | |||||
F56B6.2e.1:c.212-466A>G | |||||
F56B6.2c.1:c.512-466A>G | |||||
F56B6.2a.1:c.1697-466A>G | |||||
F56B6.2b.1:c.1586-466A>G | |||||
HGVSg | CHROMOSOME_X:g.3552081A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | |
Flanking_sequences | GGTTTTCGATTAAAAGTTAAACGTGTGTGT | TTTTGTATGAGCCATTTGAAAAATGACTCG | |||
Mapping_target | F56B6 | ||||
Type_of_mutation | Substitution | a | g | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Andersen | |||||
WBStrain00022888 | From_analysis | WGS_Andersen | |||
WBStrain00022889 | From_analysis | WGS_Andersen | |||
WBStrain00022894 | From_analysis | WGS_Andersen | |||
WBStrain00023085 | From_analysis | WGS_Andersen | |||
WBStrain00023105 | From_analysis | WGS_Andersen | |||
WBStrain00023106 | From_analysis | WGS_Andersen | |||
Laboratory | QX | ||||
Person | WBPerson1730 | ||||
Analysis | Million_mutation_project_reanalysis | ||||
WGS_Andersen | |||||
DB_info | Database (2) | ||||
Status | Live | ||||
Affects | Gene | WBGene00004350 | |||
Transcript | F56B6.2j.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2j.1:c.1706-466A>G | ||||
Intron_number | 9/14 | ||||
F56B6.2e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2e.1:c.212-466A>G | ||||
Intron_number | 1/7 | ||||
F56B6.2i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2i.1:c.1703-466A>G | ||||
Intron_number | 10/16 | ||||
F56B6.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2b.1:c.1586-466A>G | ||||
Intron_number | 9/15 | ||||
F56B6.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2a.1:c.1697-466A>G | ||||
Intron_number | 10/16 | ||||
F56B6.2h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2h.1:c.1712-466A>G | ||||
Intron_number | 10/16 | ||||
F56B6.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2c.1:c.512-466A>G | ||||
Intron_number | 4/9 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Andersen |