WormBase Tree Display for Variation: WBVar01468314
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WBVar01468314 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar01468314 | |||
Other_name | F56B6.2c.1:c.752+1047C>T | ||||
F56B6.2j.1:c.1946+1047C>T | |||||
F56B6.2e.1:c.452+1047C>T | |||||
F56B6.2a.1:c.1937+1047C>T | |||||
F56B6.2i.1:c.1943+1047C>T | |||||
F56B6.2h.1:c.1952+1047C>T | |||||
F56B6.2b.1:c.1826+1047C>T | |||||
HGVSg | CHROMOSOME_X:g.3553973C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | |
Flanking_sequences | TTTTGCCCATTGCCGCCCACTCCTTGACAG | ATCACTAATTTGCAACTGGTGTTTTTGGTG | |||
Mapping_target | F56B6 | ||||
Type_of_mutation | Substitution | c | t | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00023311 | From_analysis | WGS_Andersen | ||
Laboratory | QX | ||||
Person | WBPerson1730 | ||||
Analysis | WGS_Andersen | ||||
DB_info | Database (2) | ||||
Status | Live | ||||
Affects | Gene | WBGene00004350 | |||
Transcript | F56B6.2j.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2j.1:c.1946+1047C>T | ||||
Intron_number | 11/14 | ||||
F56B6.2e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2e.1:c.452+1047C>T | ||||
Intron_number | 3/7 | ||||
F56B6.2i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2i.1:c.1943+1047C>T | ||||
Intron_number | 12/16 | ||||
F56B6.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2b.1:c.1826+1047C>T | ||||
Intron_number | 11/15 | ||||
F56B6.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2a.1:c.1937+1047C>T | ||||
Intron_number | 12/16 | ||||
F56B6.2h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2h.1:c.1952+1047C>T | ||||
Intron_number | 12/16 | ||||
F56B6.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2c.1:c.752+1047C>T | ||||
Intron_number | 6/9 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Andersen |