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WormBase Tree Display for Variation: WBVar01513996

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Name Class

WBVar01513996NamePublic_nameWBVar01513996
Other_namecewivar00036233
Y54G2A.5c.1:c.216+212G>C
Y54G2A.5b.1:c.270+212G>C
Y54G2A.5a.1:c.318+212G>C
Y54G2A.17a.1:c.-39+2555C>G
HGVSgCHROMOSOME_IV:g.2887845G>C
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesGATTTTCGATCATTTTCGCTTTTAATTCTTCAGCTAAAATTCGGAATTTCTCTAAAAAGC
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28878432887843From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021871
WBGene00021882
TranscriptY54G2A.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.5b.1:c.270+212G>C
Intron_number3/5
Y54G2A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.5c.1:c.216+212G>C
Intron_number1/2
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-39+2555C>G
Intron_number1/8
Y54G2A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.5a.1:c.318+212G>C
Intron_number3/5
MethodWGS_Flibotte