WormBase Tree Display for Variation: WBVar01756948
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WBVar01756948 | Name | Public_name | WBVar01756948 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00456560 | |||||||
F25C8.3b.1:c.5707+80A>G | ||||||||
F25C8.3a.1:c.5734+80A>G | ||||||||
F25C8.3e.1:c.5575+80A>G | ||||||||
F25C8.3d.1:c.5848+80A>G | ||||||||
F25C8.3c.1:c.5680+80A>G | ||||||||
HGVSg | CHROMOSOME_V:g.20892713A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | ||||
Flanking_sequences | CGCCGCGCACCGCTGTGTGCAATGAAGTGC | AAAAGTAGTTATTTGAGCGGCCGACATGTT | ||||||
Mapping_target | F25C8 | |||||||
Source_location | 225 | CHROMOSOME_V | 20892682 | 20892682 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006812 | ||||||
Transcript | F25C8.3d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F25C8.3d.1:c.5848+80A>G | |||||||
Intron_number | 24/36 | |||||||
F25C8.3b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F25C8.3b.1:c.5707+80A>G | |||||||
Intron_number | 23/35 | |||||||
F25C8.3e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F25C8.3e.1:c.5575+80A>G | |||||||
Intron_number | 21/33 | |||||||
F25C8.3c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F25C8.3c.1:c.5680+80A>G | |||||||
Intron_number | 23/34 | |||||||
F25C8.3a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F25C8.3a.1:c.5734+80A>G | |||||||
Intron_number | 23/36 | |||||||
Method | WGS_Flibotte |