WormBase Tree Display for Variation: WBVar01878005

WBVar01878005 Name: Public_name: WBVar01878005
    Other_name: cewivar00592446
      CE43592:p.Ala1476=
      F25C8.3d.1:c.4428A>G
      F25C8.3c.1:c.4324+141A>G
      F25C8.3e.1:c.4246+141A>G
      F25C8.3b.1:c.4378+141A>G
      F25C8.3a.1:c.4378+141A>G
    HGVSg: CHROMOSOME_V:g.20890554A>G
  Sequence_details: SMap: S_parent: Sequence: F25C8
    Flanking_sequences: GTCACCAATTGTTCAACGTATGCGTGCAGC AGTATGCGCCAATCATCTAACTTTTTGGCG
    Mapping_target: F25C8
    Source_location: 225 CHROMOSOME_V 20890523 20890523 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00006812
    Transcript: F25C8.3d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F25C8.3d.1:c.4428A>G
        HGVSp: CE43592:p.Ala1476=
        cDNA_position: 4428
        CDS_position: 4428
        Protein_position: 1476
        Exon_number: 20/37
        Codon_change: gcA/gcG
        Amino_acid_change: A
      F25C8.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F25C8.3b.1:c.4378+141A>G
        Intron_number: 20/35
      F25C8.3e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F25C8.3e.1:c.4246+141A>G
        Intron_number: 18/33
      F25C8.3c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F25C8.3c.1:c.4324+141A>G
        Intron_number: 19/34
      F25C8.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F25C8.3a.1:c.4378+141A>G
        Intron_number: 19/36
  Method: WGS_Flibotte