WormBase Tree Display for Variation: WBVar01922387
expand all nodes | collapse all nodes | view schema
WBVar01922387 | Name | Public_name | WBVar01922387 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00640797 | |||||||
Y54G2A.35b.1:c.872+544_872+547del | ||||||||
Y54G2A.35a.1:c.917+372_917+375del | ||||||||
HGVSg | CHROMOSOME_IV:g.2963153_2963156del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | GCTTGTTAAATTGCTTTTTGAAAAATCTTT | TAGATTTTTTTATAGTTTTTAGAATGTGTT | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2963151 | 2963154 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021897 | ||||||
Transcript | Y54G2A.35b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.35b.1:c.872+544_872+547del | |||||||
Intron_number | 5/6 | |||||||
Y54G2A.35a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.35a.1:c.917+372_917+375del | |||||||
Intron_number | 5/6 | |||||||
Method | WGS_Flibotte |