WormBase Tree Display for Variation: WBVar01980167
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WBVar01980167 | Name | Public_name | WBVar01980167 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00706245 | |||||||
F56B6.2j.1:c.1947-629del | ||||||||
F56B6.2f.1:c.-95del | ||||||||
F56B6.2i.1:c.1944-629del | ||||||||
F56B6.2a.1:c.1938-629del | ||||||||
F56B6.2b.1:c.1827-629del | ||||||||
F56B6.2e.1:c.453-629del | ||||||||
F56B6.2c.1:c.753-629del | ||||||||
F56B6.2h.1:c.1953-629del | ||||||||
HGVSg | CHROMOSOME_X:g.3555811del | |||||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | ||||
Flanking_sequences | AGTGCAGTTCACCCATTACTCTTCCCATCT | CCCCCCCCTTTTCTCCCTATTGCGCACTAT | ||||||
Mapping_target | F56B6 | |||||||
Source_location | 225 | CHROMOSOME_X | 3555798 | 3555798 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004350 | ||||||
Transcript | F56B6.2e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2e.1:c.453-629del | |||||||
Intron_number | 3/7 | |||||||
F56B6.2i.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2i.1:c.1944-629del | |||||||
Intron_number | 12/16 | |||||||
F56B6.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2a.1:c.1938-629del | |||||||
Intron_number | 12/16 | |||||||
F56B6.2h.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2h.1:c.1953-629del | |||||||
Intron_number | 12/16 | |||||||
F56B6.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2c.1:c.753-629del | |||||||
Intron_number | 6/9 | |||||||
F56B6.2f.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2f.1:c.-95del | |||||||
cDNA_position | 30 | |||||||
Exon_number | 1/7 | |||||||
F56B6.2j.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2j.1:c.1947-629del | |||||||
Intron_number | 11/14 | |||||||
F56B6.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2b.1:c.1827-629del | |||||||
Intron_number | 11/15 | |||||||
Method | WGS_Flibotte |