WormBase Tree Display for Variation: WBVar02020217
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WBVar02020217 | Name | Public_name | WBVar02020217 | ||
---|---|---|---|---|---|
Other_name | cewivar00748725 | ||||
Y54G2A.5c.1:c.109_111del | |||||
CE48099:p.Asp72del | |||||
CE48813:p.Asp38del | |||||
CE33889:p.Asp56del | |||||
Y54G2A.5b.1:c.163_165del | |||||
Y54G2A.5a.1:c.211_213del | |||||
Y54G2A.17a.1:c.-39+2872_-39+2874del | |||||
HGVSg | CHROMOSOME_IV:g.2887526_2887528del | ||||
Sequence_details (6) | |||||
Variation_type | Natural_variant | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | VC | ||||
Analysis | Million_mutation_project_reanalysis | ||||
Status | Live | ||||
Affects | Gene | WBGene00021871 | |||
WBGene00021882 | |||||
Transcript | Y54G2A.5b.1 | VEP_consequence | inframe_deletion | ||
VEP_impact | MODERATE | ||||
HGVSc | Y54G2A.5b.1:c.163_165del | ||||
HGVSp | CE33889:p.Asp56del | ||||
cDNA_position | 260-262 | ||||
CDS_position | 163-165 | ||||
Protein_position | 55 | ||||
Exon_number | 3/6 | ||||
Codon_change | GAT/- | ||||
Amino_acid_change | D/- | ||||
Y54G2A.5c.1 | VEP_consequence | inframe_deletion | |||
VEP_impact | MODERATE | ||||
HGVSc | Y54G2A.5c.1:c.109_111del | ||||
HGVSp | CE48813:p.Asp38del | ||||
cDNA_position | 109-111 | ||||
CDS_position | 109-111 | ||||
Protein_position | 37 | ||||
Exon_number | 1/3 | ||||
Codon_change | GAT/- | ||||
Amino_acid_change | D/- | ||||
Y54G2A.17a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.17a.1:c.-39+2872_-39+2874del | ||||
Intron_number | 1/8 | ||||
Y54G2A.5a.1 | VEP_consequence | inframe_deletion | |||
VEP_impact | MODERATE | ||||
HGVSc | Y54G2A.5a.1:c.211_213del | ||||
HGVSp | CE48099:p.Asp72del | ||||
cDNA_position | 227-229 | ||||
CDS_position | 211-213 | ||||
Protein_position | 71 | ||||
Exon_number | 3/6 | ||||
Codon_change | GAT/- | ||||
Amino_acid_change | D/- | ||||
Method | WGS_Flibotte |