Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar02048226

expand all nodes | collapse all nodes | view schema

Name Class

WBVar02048226NamePublic_nameWBVar02048226
Other_namecewivar00777390
Y54G2A.36.1:c.-396_-370del
Y54G2A.36.3:c.-359_-333del
Y54G2A.36.4:c.-324_-298del
Y54G2A.36.2:c.-370_-344del
Y54G2A.20:n.1830-195_1830-169del
HGVSgCHROMOSOME_IV:g.2897727_2897753del
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTCGATGTTGTGGCCGCTGATGTACAAGGATATCGAAAGGAGCATCTTCTTCATCGACAAA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28977252897751From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022878From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021898
WBGene00021885
TranscriptY54G2A.36.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.2:c.-370_-344del
cDNA_position32-58
Exon_number1/5
Y54G2A.36.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.1:c.-396_-370del
cDNA_position32-58
Exon_number1/5
Y54G2A.36.4VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.4:c.-324_-298del
cDNA_position34-60
Exon_number1/6
Y54G2A.36.3VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.3:c.-359_-333del
cDNA_position34-60
Exon_number1/5
PseudogeneY54G2A.20VEP_consequenceintron_variant,non_coding_transcript_variant
VEP_impactMODIFIER
HGVScY54G2A.20:n.1830-195_1830-169del
Intron_number11/13
MethodWGS_Flibotte