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WormBase Tree Display for Variation: WBVar02082258

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Name Class

WBVar02082258NamePublic_nameWBVar02082258
Other_namecewivar00811891
CE33889:p.Gln2_Ile6delinsAsnGlySerVal
Y54G2A.5b.1:c.4_16delinsAATGGTTCGG
Y54G2A.17a.1:c.-39+3333_-39+3345delinsCCGAACCATT
CE48099:p.Gln2_Ile6delinsAsnGlySerVal
Y54G2A.5a.1:c.4_16delinsAATGGTTCGG
HGVSgCHROMOSOME_IV:g.2887055_2887067delinsAATGGTTCGG
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTTTCATATTTGTTGTAAGCTATAGGAAATGTAAAGCAGGTGAGTGCTGTACTCTACTTGA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28870532887065From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionAATGGTTCGG
Deletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021871
WBGene00021882
TranscriptY54G2A.5b.1VEP_consequenceprotein_altering_variant
VEP_impactMODERATE
HGVScY54G2A.5b.1:c.4_16delinsAATGGTTCGG
HGVSpCE33889:p.Gln2_Ile6delinsAsnGlySerVal
cDNA_position101-113
CDS_position4-16
Protein_position2-6
Exon_number2/6
Codon_changeCAGAAATTTTCAAta/AATGGTTCGGta
Amino_acid_changeQKFSI/NGSV
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-39+3333_-39+3345delinsCCGAACCATT
Intron_number1/8
Y54G2A.5a.1VEP_consequenceprotein_altering_variant
VEP_impactMODERATE
HGVScY54G2A.5a.1:c.4_16delinsAATGGTTCGG
HGVSpCE48099:p.Gln2_Ile6delinsAsnGlySerVal
cDNA_position20-32
CDS_position4-16
Protein_position2-6
Exon_number2/6
Codon_changeCAGAAATTTTCAAta/AATGGTTCGGta
Amino_acid_changeQKFSI/NGSV
MethodWGS_Flibotte